Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3310 (ccmE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3310
Name
ccmE
Replicon chromosome
Genomic location 3833831 - 3834298 (- strand)

Cross-References

RefSeq YP_275469.1
GI 71735098
Entrez 3557424
INSDC AAZ34862.1
NCBI Locus Tag PSPPH_3310
UniParc UPI0000575BBC
UniProtKB Acc Q48GL4
UniProtKB ID CCME_PSE14
UniRef100 UniRef100_Q48GL4
UniRef50 UniRef50_Q4KG23
UniRef90 UniRef90_Q4ZR01

Product

Feature Type CDS
Coding Frame 1
Product Name
cytochrome C biogenesis protein CcmE
Synonyms
Evidence for Translation
Charge (pH 7) 4.23
Kyte-Doolittle Hydrophobicity Value -0.016
Molecular Weight (kDa) 16.4
Isoelectric Point (pI) 10.07

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 191 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001394 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3310
Search term: ccmE

Human Homologs

References

No references are associated with this feature.