Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3378

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3378
Name
Replicon chromosome
Genomic location 3906120 - 3906470 (- strand)

Cross-References

RefSeq YP_275536.1
GI 71736904
Entrez 3559292
INSDC AAZ36668.1
NCBI Locus Tag PSPPH_3378
UniParc UPI0000575BFB
UniProtKB Acc Q48GE7
UniProtKB ID Q48GE7_PSE14
UniRef100 UniRef100_Q48GE7
UniRef50 UniRef50_Q4ZQT8
UniRef90 UniRef90_Q4ZQT8

Product

Feature Type CDS
Coding Frame 1
Product Name
STAS domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.84
Kyte-Doolittle Hydrophobicity Value -0.101
Molecular Weight (kDa) 13.0
Isoelectric Point (pI) 6.34

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 40 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002281 (518 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3378

Human Homologs

References

No references are associated with this feature.