Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3504

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3504
Name
Replicon chromosome
Genomic location 4043310 - 4043636 (+ strand)

Cross-References

RefSeq YP_275655.1
GI 71734991
Entrez 3557315
INSDC AAZ34755.1
NCBI Locus Tag PSPPH_3504
UniParc UPI0000008974
UniProtKB Acc Q48G30
UniProtKB ID Q48G30_PSE14
UniRef100 UniRef100_A0A038G8F5
UniRef50 UniRef50_F8H3I4
UniRef90 UniRef90_A0A038G8F5

Product

Feature Type CDS
Coding Frame 1
Product Name
alginate biosynthesis transcriptional activator
Synonyms
Evidence for Translation
Charge (pH 7) -0.81
Kyte-Doolittle Hydrophobicity Value -0.711
Molecular Weight (kDa) 12.4
Isoelectric Point (pI) 6.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 17 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002243 (527 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3504

Human Homologs

References

No references are associated with this feature.