Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3662 (rpsA)

Gene Feature Overview

Strain	Pseudomonas savastanoi pv. phaseolicola 1448A GCF_000012205.1|latest
Locus Tag	PSPPH_3662
Name	rpsA
Replicon	chromosome
Genomic location	4205504 - 4207195 (- strand)

Cross-References

RefSeq	YP_275804.1
GI	71737484
Entrez	3559892
INSDC	AAZ37248.1
NCBI Locus Tag	PSPPH_3662
UniParc	UPI0000008914
UniProtKB Acc	Q48FN2
UniProtKB ID	Q48FN2_PSE14
UniRef100	UniRef100_A0A038G8S0
UniRef50	UniRef50_P0AG69
UniRef90	UniRef90_Q9HZ71

Product

Feature Type	CDS
Coding Frame	1
Product Name	30S ribosomal protein S1
Synonyms
Evidence for Translation
Charge (pH 7)	-27.85
Kyte-Doolittle Hydrophobicity Value	-0.294
Molecular Weight (kDa)	62.3
Isoelectric Point (pI)	4.62

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 597 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002453 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPPH_3662 Search term: rpsA Search term: 30S ribosomal protein S1

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000480986 zinc finger CCHC-type containing 17 [Source:HGNC Symbol;Acc:HGNC:30246] E-value: 3.2e-07 Percent Identity: 37.5

References