Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3739
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest |
| Locus Tag |
PSPPH_3739
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4289212 - 4290033 (- strand) |
Cross-References
| RefSeq | YP_275881.1 |
| GI | 71735302 |
| Entrez | 3557638 |
| NCBI Locus Tag | PSPPH_3739 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ISPsy24, transposase orfB
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 19.79 |
| Kyte-Doolittle Hydrophobicity Value | -0.610 |
| Molecular Weight (kDa) | 31998.4 |
| Isoelectric Point (pI) | 10.67 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 373 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG019634 (42 members) |
| Putative Inparalogs |
4 predicted inparalogs ISPsy24, transposase orfB (PSPPH_1845) 100.0% identity ISPsy24, transposase orfB (PSPPH_4988) 99.1% identity ISPsy24, transposase orfB (PSPPH_2798) 99.2% identity ISPsy24, transposase orfB (PSPPH_A0141) 99.6% identity |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSPPH_3739
Search term: ISPsy24, transposase orfB
|
Human Homologs
References
No references are associated with this feature.