Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3755

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3755
Name
Replicon chromosome
Genomic location 4307552 - 4308970 (+ strand)

Cross-References

RefSeq YP_275897.1
GI 71735070
EC Number 4.1.1.-
Entrez 3557396
NCBI Locus Tag PSPPH_3755

Product

Feature Type CDS
Coding Frame 1
Product Name
L-2,4-diaminobutyrate decarboxylase
Synonyms
Evidence for Translation
Charge (pH 7) -7.12
Kyte-Doolittle Hydrophobicity Value 0.072
Molecular Weight (kDa) 51133.9
Isoelectric Point (pI) 6.26

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 298 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015765 (72 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3755

Human Homologs

Ensembl 110, assembly GRCh38.p14
glutamate decarboxylase 2 [Source:HGNC Symbol;Acc:HGNC:4093]
E-value: 3.6e-36
Percent Identity: 27.8
Ensembl 110, assembly GRCh38.p14
glutamate decarboxylase 2 [Source:HGNC Symbol;Acc:HGNC:4093]
E-value: 3.6e-36
Percent Identity: 27.8
Ensembl 110, assembly GRCh38.p14
glutamate decarboxylase 2 [Source:HGNC Symbol;Acc:HGNC:4093]
E-value: 3.6e-36
Percent Identity: 27.8

References

No references are associated with this feature.