Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3785 (dinP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3785
Name
dinP
Replicon chromosome
Genomic location 4335176 - 4336237 (- strand)

Cross-References

RefSeq YP_275925.1
GI 71733882
EC Number 2.7.7.7
Entrez 3556181
INSDC AAZ33646.1
NCBI Locus Tag PSPPH_3785
UniParc UPI0000575D5F
UniProtKB Acc Q48FB2
UniProtKB ID DPO4_PSE14
UniRef100 UniRef100_Q48FB2
UniRef50 UniRef50_Q88NK4
UniRef90 UniRef90_Q87Y22

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA polymerase IV
Synonyms
Evidence for Translation
Charge (pH 7) 4.23
Kyte-Doolittle Hydrophobicity Value -0.271
Molecular Weight (kDa) 39.1
Isoelectric Point (pI) 8.14

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 523 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000889 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3785
Search term: dinP
Search term: DNA polymerase IV

Human Homologs

Ensembl 110, assembly GRCh38.p14
REV1 DNA directed polymerase [Source:HGNC Symbol;Acc:HGNC:14060]
E-value: 3.1e-40
Percent Identity: 29.9

References

No references are associated with this feature.