Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3789

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3789
Name
Replicon chromosome
Genomic location 4339872 - 4341206 (+ strand)

Cross-References

RefSeq YP_275927.1
GI 71736876
Entrez 3559263
INSDC AAZ36640.1
NCBI Locus Tag PSPPH_3789
UniParc UPI0000575D61
UniProtKB Acc Q48FB0
UniProtKB ID Q48FB0_PSE14
UniRef100 UniRef100_Q48FB0
UniRef50 UniRef50_G8QC72
UniRef90 UniRef90_Q87Y20

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -13.70
Kyte-Doolittle Hydrophobicity Value -0.119
Molecular Weight (kDa) 48.2
Isoelectric Point (pI) 4.90

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 33 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000885 (507 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3789

Human Homologs

References

No references are associated with this feature.