Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3796

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3796
Name
Replicon chromosome
Genomic location 4348251 - 4348943 (+ strand)

Cross-References

RefSeq YP_275934.1
GI 71735714
Entrez 3558066
INSDC AAZ35478.1
NCBI Locus Tag PSPPH_3796
UniParc UPI0000575D68
UniProtKB Acc Q48FA3
UniProtKB ID Q48FA3_PSE14
UniRef100 UniRef100_Q48FA3
UniRef50 UniRef50_Q9RPT0
UniRef90 UniRef90_S3MCH9

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.66
Kyte-Doolittle Hydrophobicity Value 0.001
Molecular Weight (kDa) 25.5
Isoelectric Point (pI) 6.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 244 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002240 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3796

Human Homologs

Ensembl 110, assembly GRCh38.p14
tRNA methyltransferase O [Source:HGNC Symbol;Acc:HGNC:30967]
E-value: 9.4e-30
Percent Identity: 48.1

References

No references are associated with this feature.