Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3875 (wspR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3875
Name
wspR
Replicon chromosome
Genomic location 4429403 - 4430407 (- strand)

Cross-References

RefSeq YP_276013.1
GI 71734371
Entrez 3556676
INSDC AAZ34135.1
NCBI Locus Tag PSPPH_3875
UniParc UPI0000575DB2
UniProtKB Acc Q48F24
UniProtKB ID Q48F24_PSE14
UniRef100 UniRef100_F3EAJ5
UniRef50 UniRef50_Q886S7
UniRef90 UniRef90_Q886S7

Product

Feature Type CDS
Coding Frame 1
Product Name
diguanylate cyclase response regulator, WspR
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Charge (pH 7) -3.89
Kyte-Doolittle Hydrophobicity Value -0.245
Molecular Weight (kDa) 37.1
Isoelectric Point (pI) 6.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3I5A SIGNALING PROTEIN 07/03/09 Crystal structure of full-length WpsR from Pseudomonas syringae Pseudomonas syringae pv. tomato 2.796 X-RAY DIFFRACTION 97.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 600 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000167 (2758 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3875
Search term: wspR

Human Homologs

References

Determinants for the activation and autoinhibition of the diguanylate cyclase response regulator WspR.
De N, Navarro MV, Raghavan RV, Sondermann H
J Mol Biol 2009 Oct 30;393(3):619-33
PubMed ID: 19695263