Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3949

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3949
Name
Replicon chromosome
Genomic location 4511191 - 4511568 (- strand)

Cross-References

RefSeq YP_276085.1
GI 71736748
Entrez 3559133
INSDC AAZ36512.1
NCBI Locus Tag PSPPH_3949
UniParc UPI0000575DF3
UniProtKB Acc Q48EV2
UniProtKB ID Q48EV2_PSE14
UniRef100 UniRef100_Q48EV2
UniRef50 UniRef50_Q87XG0
UniRef90 UniRef90_Q87XG0

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.46
Kyte-Doolittle Hydrophobicity Value -0.058
Molecular Weight (kDa) 14.3
Isoelectric Point (pI) 7.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 30 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000743 (378 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3949

Human Homologs

References

No references are associated with this feature.