Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3962 (tctD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3962
Name
tctD
Replicon chromosome
Genomic location 4524607 - 4525278 (- strand)

Cross-References

RefSeq YP_276098.1
GI 71734320
Entrez 3556625
INSDC AAZ34084.1
NCBI Locus Tag PSPPH_3962
UniParc UPI0000575DFE
UniProtKB Acc Q48ET9
UniProtKB ID Q48ET9_PSE14
UniRef100 UniRef100_F3ELU3
UniRef50 UniRef50_Q4KGR4
UniRef90 UniRef90_Q4KGR4

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-binding response regulator TctD
Synonyms
Evidence for Translation
Charge (pH 7) -4.82
Kyte-Doolittle Hydrophobicity Value -0.004
Molecular Weight (kDa) 24.6
Isoelectric Point (pI) 5.41

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 618 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000730 (530 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3962
Search term: tctD

Human Homologs

References

No references are associated with this feature.