Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4135

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_4135
Name
Replicon chromosome
Genomic location 4721381 - 4722541 (+ strand)

Cross-References

RefSeq YP_276257.1
GI 71736551
Entrez 3558931
INSDC AAZ36315.1
NCBI Locus Tag PSPPH_4135
UniParc UPI0000575E92
UniProtKB Acc Q48ED1
UniProtKB ID Q48ED1_PSE14
UniRef100 UniRef100_Q48ED1
UniRef50 UniRef50_G8QBT6
UniRef90 UniRef90_Q48ED1

Product

Feature Type CDS
Coding Frame 1
Product Name
serine protease
Synonyms
Evidence for Translation
Charge (pH 7) 1.48
Kyte-Doolittle Hydrophobicity Value -0.015
Molecular Weight (kDa) 41.0
Isoelectric Point (pI) 8.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 615 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004035 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_4135
Search term: serine protease

Human Homologs

Ensembl 110, assembly GRCh38.p14
HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:HGNC:9476]
E-value: 4.3e-35
Percent Identity: 35.2
Ensembl 110, assembly GRCh38.p14
HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:HGNC:9476]
E-value: 4.3e-35
Percent Identity: 35.2

References

No references are associated with this feature.