Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4539

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_4539
Name
Replicon chromosome
Genomic location 5173332 - 5175449 (+ strand)

Cross-References

RefSeq YP_276655.1
GI 71733615
Entrez 3555903
INSDC AAZ33379.1
NCBI Locus Tag PSPPH_4539
UniParc UPI0000575FF9
UniProtKB Acc Q48D86
UniProtKB ID Q48D86_PSE14
UniRef100 UniRef100_Q48D86
UniRef50 UniRef50_Q48D86
UniRef90 UniRef90_Q48D86

Product

Feature Type CDS
Coding Frame 1
Product Name
transposon Tn7-like transposase B
Synonyms
Evidence for Translation
Charge (pH 7) 25.51
Kyte-Doolittle Hydrophobicity Value -0.344
Molecular Weight (kDa) 78557.3
Isoelectric Point (pI) 10.00

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 70 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG021606 (19 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_4539

Human Homologs

References

No references are associated with this feature.