Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4591 (rplD)

Gene Feature Overview

Strain	Pseudomonas savastanoi pv. phaseolicola 1448A GCF_000012205.1|latest
Locus Tag	PSPPH_4591
Name	rplD
Replicon	chromosome
Genomic location	5225817 - 5226419 (- strand)

Cross-References

RefSeq	YP_276705.1
GI	71736691
Entrez	3559075
INSDC	AAZ36455.1
NCBI Locus Tag	PSPPH_4591
UniParc	UPI0000576016
UniProtKB Acc	Q48D37
UniProtKB ID	RL4_PSE14
UniRef100	UniRef100_Q48D37
UniRef50	UniRef50_P49226
UniRef90	UniRef90_Q889X0

Product

Feature Type	CDS
Coding Frame	1
Product Name	50S ribosomal protein L4
Synonyms
Evidence for Translation
Charge (pH 7)	8.71
Kyte-Doolittle Hydrophobicity Value	-0.291
Molecular Weight (kDa)	21.9
Isoelectric Point (pI)	10.46

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 591 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001448 (528 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPPH_4591 Search term: rplD Search term: 50S ribosomal protein L4

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000253099 mitochondrial ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:14276] E-value: 5.9e-12 Percent Identity: 28.5
Ensembl 110, assembly GRCh38.p14	ENSP00000306902 mitochondrial ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:14276] E-value: 5.9e-12 Percent Identity: 28.5
Ensembl 110, assembly GRCh38.p14	ENSP00000468569 mitochondrial ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:14276] E-value: 5.9e-12 Percent Identity: 28.5

References