Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4749

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_4749
Name
Replicon chromosome
Genomic location 5391161 - 5392339 (+ strand)

Cross-References

RefSeq YP_276849.1
GI 71734099
Entrez 3556401
INSDC AAZ33863.1
NCBI Locus Tag PSPPH_4749
UniParc UPI000057609B
UniProtKB Acc Q48CP4
UniProtKB ID Q48CP4_PSE14
UniRef100 UniRef100_Q48CP4
UniRef50 UniRef50_G8Q8H8
UniRef90 UniRef90_S3N3C1

Product

Feature Type CDS
Coding Frame 1
Product Name
glycine/betaine/L-proline ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.48
Kyte-Doolittle Hydrophobicity Value -0.183
Molecular Weight (kDa) 43.4
Isoelectric Point (pI) 6.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004691 (971 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_4749

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
E-value: 1.3e-18
Percent Identity: 30.9
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
E-value: 1.3e-18
Percent Identity: 30.9

References

No references are associated with this feature.