Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4751 (soxB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_4751
Name
soxB
Replicon chromosome
Genomic location 5393880 - 5395130 (+ strand)

Cross-References

RefSeq YP_276851.1
GI 71738042
EC Number 1.5.3.1
Entrez 3560473
INSDC AAZ37806.1
NCBI Locus Tag PSPPH_4751
UniParc UPI000057609D
UniProtKB Acc Q48CP2
UniProtKB ID Q48CP2_PSE14
UniRef100 UniRef100_A0A038G838
UniRef50 UniRef50_O87388
UniRef90 UniRef90_Q9HTE8

Product

Feature Type CDS
Coding Frame 1
Product Name
sarcosine oxidase subunit beta
Synonyms
Evidence for Translation
Charge (pH 7) 7.17
Kyte-Doolittle Hydrophobicity Value -0.178
Molecular Weight (kDa) 45.3
Isoelectric Point (pI) 8.46

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 294 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004970 (512 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_4751
Search term: soxB

Human Homologs

References

No references are associated with this feature.