Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4778 (rpoH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_4778
Name
rpoH
Replicon chromosome
Genomic location 5422376 - 5423230 (- strand)

Cross-References

RefSeq YP_276878.1
GI 71737989
Entrez 3560417
INSDC AAZ37753.1
NCBI Locus Tag PSPPH_4778
UniParc UPI00005760B5
UniProtKB Acc Q48CL5
UniProtKB ID Q48CL5_PSE14
UniRef100 UniRef100_F3ECX5
UniRef50 UniRef50_P11539
UniRef90 UniRef90_Q88AG0

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase factor sigma-32
Synonyms
Evidence for Translation
Charge (pH 7) -4.59
Kyte-Doolittle Hydrophobicity Value -0.480
Molecular Weight (kDa) 32.6
Isoelectric Point (pI) 6.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000367 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_4778
Search term: rpoH

Human Homologs

References

No references are associated with this feature.