Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4880 (rpiA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_4880
Name
rpiA
Replicon chromosome
Genomic location 5549952 - 5550623 (+ strand)

Cross-References

RefSeq YP_276972.1
GI 71736665
EC Number 5.3.1.6
Entrez 3559049
INSDC AAZ36429.1
NCBI Locus Tag PSPPH_4880
UniParc UPI000057610E
UniProtKB Acc Q48CC1
UniProtKB ID RPIA_PSE14
UniRef100 UniRef100_Q48CC1
UniRef50 UniRef50_Q13ZQ5
UniRef90 UniRef90_Q4K469

Product

Feature Type CDS
Coding Frame 1
Product Name
ribose-5-phosphate isomerase A
Synonyms
Evidence for Translation
Charge (pH 7) -5.86
Kyte-Doolittle Hydrophobicity Value 0.256
Molecular Weight (kDa) 23.4
Isoelectric Point (pI) 5.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 374 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000322 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_4880
Search term: rpiA

Human Homologs

Ensembl 110, assembly GRCh38.p14
ribose 5-phosphate isomerase A [Source:HGNC Symbol;Acc:HGNC:10297]
E-value: 1.6e-18
Percent Identity: 33.9

References

No references are associated with this feature.