Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4887

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_4887
Name
Replicon chromosome
Genomic location 5557154 - 5557888 (- strand)

Cross-References

RefSeq YP_276978.1
GI 71734021
Entrez 3556323
INSDC AAZ33785.1
NCBI Locus Tag PSPPH_4887
UniParc UPI0000576114
UniProtKB Acc Q48CB5
UniProtKB ID Q48CB5_PSE14
UniRef100 UniRef100_Q48CB5
UniRef50 UniRef50_D7I6A7
UniRef90 UniRef90_D7I6A7

Product

Feature Type CDS
Coding Frame 1
Product Name
2OG-Fe(II) oxygenase
Synonyms
Evidence for Translation
Charge (pH 7) -5.56
Kyte-Doolittle Hydrophobicity Value -0.345
Molecular Weight (kDa) 28039.7
Isoelectric Point (pI) 5.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 81 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000307 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_4887

Human Homologs

References

No references are associated with this feature.