Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_5004

Gene Feature Overview

Strain	Pseudomonas savastanoi pv. phaseolicola 1448A GCF_000012205.1|latest
Locus Tag	PSPPH_5004
Name
Replicon	chromosome
Genomic location	5672671 - 5673363 (- strand)

Cross-References

RefSeq	YP_277089.1
GI	71735295
Entrez	3557631
INSDC	AAZ35059.1
NCBI Locus Tag	PSPPH_5004
UniParc	UPI000057617C
UniProtKB Acc	Q48C05
UniProtKB ID	Q48C05_PSE14
UniRef100	UniRef100_Q48C05
UniRef50	UniRef50_D7I6G3
UniRef90	UniRef90_D7I6G3

Product

Feature Type	CDS
Coding Frame	1
Product Name	HAD family hydrolase
Synonyms
Evidence for Translation
Charge (pH 7)	-9.86
Kyte-Doolittle Hydrophobicity Value	-0.160
Molecular Weight (kDa)	25.6
Isoelectric Point (pI)	4.99

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
3VAY	HYDROLASE	12/30/11	Crystal structure of 2-Haloacid Dehalogenase from Pseudomonas syringae pv. Tomato DC3000	Pseudomonas syringae pv. tomato	1.979	X-RAY DIFFRACTION	93.5

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 390 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004859 (537 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPPH_5004 Search term: HAD family hydrolase

Human Homologs

References