Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_5088

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_5088
Name
Replicon chromosome
Genomic location 5772891 - 5773850 (+ strand)

Cross-References

RefSeq YP_277170.1
GI 71736703
Entrez 3559087
INSDC AAZ36467.1
NCBI Locus Tag PSPPH_5088
UniParc UPI00005761CA
UniProtKB Acc Q48BS5
UniProtKB ID Q48BS5_PSE14
UniRef100 UniRef100_Q48BS5
UniRef50 UniRef50_G8PZA3
UniRef90 UniRef90_S3NQZ1

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.91
Kyte-Doolittle Hydrophobicity Value -0.229
Molecular Weight (kDa) 36543.3
Isoelectric Point (pI) 7.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 54 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG018983 (113 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_5088

Human Homologs

References

No references are associated with this feature.