Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_5144

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_5144
Name
Replicon chromosome
Genomic location 5834698 - 5835633 (+ strand)

Cross-References

RefSeq YP_277221.1
GI 71736690
Entrez 3559074
INSDC AAZ36454.1
NCBI Locus Tag PSPPH_5144
UniParc UPI00005761FA
UniProtKB Acc Q48BM4
UniProtKB ID Q48BM4_PSE14
UniRef100 UniRef100_Q48BM4
UniRef50 UniRef50_Q4K3G6
UniRef90 UniRef90_Q48BM4

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.51
Kyte-Doolittle Hydrophobicity Value -0.099
Molecular Weight (kDa) 35141.3
Isoelectric Point (pI) 7.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 542 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004987 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_5144

Human Homologs

References

No references are associated with this feature.