Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_5204

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_5204
Name
Replicon chromosome
Genomic location 5908358 - 5909125 (- strand)

Cross-References

RefSeq YP_277277.1
GI 71736196
Entrez 3558563
INSDC AAZ35960.1
NCBI Locus Tag PSPPH_5204
UniParc UPI0000576232
UniProtKB Acc Q48BG8
UniProtKB ID Q48BG8_PSE14
UniRef100 UniRef100_Q48BG8
UniRef50 UniRef50_Q9HT24
UniRef90 UniRef90_Q48BG8

Product

Feature Type CDS
Coding Frame 1
Product Name
DeoR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -4.34
Kyte-Doolittle Hydrophobicity Value -0.126
Molecular Weight (kDa) 28.0
Isoelectric Point (pI) 5.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 341 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005081 (530 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_5204

Human Homologs

References

No references are associated with this feature.