Pseudomonas sp. UW4, PputUW4_00071 (ysxC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_00071
Name
ysxC
Replicon chromosome
Genomic location 73618 - 74262 (- strand)

Cross-References

RefSeq YP_007027085.1
GI 426406986
Entrez 14053758
INSDC AFY17280.1
NCBI Locus Tag PputUW4_00071
UniParc UPI000270B6D6
UniProtKB Acc K9NDK1
UniProtKB ID K9NDK1_9PSED
UniRef100 UniRef100_K9NDK1
UniRef50 UniRef50_Q88AP4
UniRef90 UniRef90_Q88AP4

Product

Feature Type CDS
Coding Frame 1
Product Name
ribosome biogenesis GTP-binding protein YsxC
Synonyms
Evidence for Translation
Charge (pH 7) 2.13
Kyte-Doolittle Hydrophobicity Value -0.144
Molecular Weight (kDa) 23.7
Isoelectric Point (pI) 8.22

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 453 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005031 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_00071
Search term: ysxC

Human Homologs

References

No references are associated with this feature.