Pseudomonas sp. UW4, PputUW4_00800 (slyD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_00800
Name
slyD
Replicon chromosome
Genomic location 957420 - 957905 (+ strand)

Cross-References

RefSeq YP_007027812.1
GI 426407713
EC Number 5.2.1.8
Entrez 14053851
INSDC AFY18007.1
NCBI Locus Tag PputUW4_00800
UniParc UPI00026FD75E
UniProtKB Acc K9NEH4
UniProtKB ID K9NEH4_9PSED
UniRef100 UniRef100_K9NEH4
UniRef50 UniRef50_Q4KI62
UniRef90 UniRef90_Q4KI62

Product

Feature Type CDS
Coding Frame 1
Product Name
FKBP-type peptidyl-prolyl cis-transisomerase SlyD
Synonyms
Evidence for Translation
Charge (pH 7) -17.08
Kyte-Doolittle Hydrophobicity Value -0.121
Molecular Weight (kDa) 17.0
Isoelectric Point (pI) 4.18

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 356 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000805 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_00800
Search term: slyD

Human Homologs

References

No references are associated with this feature.