Pseudomonas sp. UW4, PputUW4_02420

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_02420
Name
Replicon chromosome
Genomic location 2825482 - 2825844 (- strand)

Cross-References

RefSeq YP_007029423.1
GI 426409324
Entrez 14052160
INSDC AFY19618.1
NCBI Locus Tag PputUW4_02420
UniParc UPI00026FD821
UniProtKB Acc K9NKD6
UniProtKB ID K9NKD6_9PSED
UniRef100 UniRef100_K9NKD6
UniRef50 UniRef50_Q9HW86
UniRef90 UniRef90_Q4KB87

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 7.47
Kyte-Doolittle Hydrophobicity Value -0.704
Molecular Weight (kDa) 13.4
Isoelectric Point (pI) 10.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 6 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002890 (507 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_02420

Human Homologs

References

No references are associated with this feature.