Pseudomonas sp. UW4, PputUW4_02467

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_02467
Name
Replicon chromosome
Genomic location 2879275 - 2880426 (- strand)

Cross-References

RefSeq YP_007029469.1
GI 426409370
Entrez 14052195
INSDC AFY19664.1
NCBI Locus Tag PputUW4_02467
UniParc UPI0002703BC0
UniProtKB Acc K9NIT1
UniProtKB ID K9NIT1_9PSED
UniRef100 UniRef100_K9NIT1
UniRef50 UniRef50_Q4KC62
UniRef90 UniRef90_W6VQU1

Product

Feature Type CDS
Coding Frame 1
Product Name
acyl-CoA dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -7.04
Kyte-Doolittle Hydrophobicity Value -0.073
Molecular Weight (kDa) 41.5
Isoelectric Point (pI) 5.65

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 474 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016345 (179 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_02467

Human Homologs

Ensembl 110, assembly GRCh38.p14
acyl-CoA dehydrogenase short chain [Source:HGNC Symbol;Acc:HGNC:90]
E-value: 2.9e-92
Percent Identity: 48.5

References

No references are associated with this feature.