Pseudomonas sp. UW4, PputUW4_03837 (ccmD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_03837
Name
ccmD
Replicon chromosome
Genomic location 4433610 - 4433786 (- strand)

Cross-References

RefSeq YP_007030834.1
GI 426410735
Entrez 14056158
INSDC AFY21029.1
NCBI Locus Tag PputUW4_03837
UniParc UPI0002703D2F
UniProtKB Acc K9NMQ7
UniProtKB ID K9NMQ7_9PSED
UniRef100 UniRef100_K9NMQ7
UniRef50 UniRef50_G8Q0R0
UniRef90 UniRef90_G8Q0R0

Product

Feature Type CDS
Coding Frame 1
Product Name
cytochrome c-type biogenesis protein
Synonyms
Evidence for Translation
Charge (pH 7) 5.43
Kyte-Doolittle Hydrophobicity Value 0.122
Molecular Weight (kDa) 6.5
Isoelectric Point (pI) 10.56

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 26 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001393 (529 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_03837
Search term: ccmD

Human Homologs

References

No references are associated with this feature.