Pseudomonas sp. UW4, PputUW4_04577 (prfA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_04577
Name
prfA
Replicon chromosome
Genomic location 5244116 - 5245198 (- strand)

Cross-References

RefSeq YP_007031574.1
GI 426411475
Entrez 14052514
INSDC AFY21769.1
NCBI Locus Tag PputUW4_04577
UniParc UPI00027033AD
UniProtKB Acc K9NPW7
UniProtKB ID K9NPW7_9PSED
UniRef100 UniRef100_K9NPW7
UniRef50 UniRef50_Q4K695
UniRef90 UniRef90_Q4K695

Product

Feature Type CDS
Coding Frame 1
Product Name
peptide chain release factor 1
Synonyms
Evidence for Translation
Charge (pH 7) -16.35
Kyte-Doolittle Hydrophobicity Value -0.523
Molecular Weight (kDa) 40.1
Isoelectric Point (pI) 4.70

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 593 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004315 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_04577
Search term: prfA

Human Homologs

Ensembl 110, assembly GRCh38.p14
mitochondrial translation release factor 1 like [Source:HGNC Symbol;Acc:HGNC:21051]
E-value: 4.2e-69
Percent Identity: 46.2

References

No references are associated with this feature.