Pseudomonas sp. UW4, PputUW4_04671 (rpsT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_04671
Name
rpsT
Replicon chromosome
Genomic location 5353979 - 5354257 (+ strand)

Cross-References

RefSeq YP_007031667.1
GI 426411568
Entrez 14052654
INSDC AFY21862.1
NCBI Locus Tag PputUW4_04671
UniParc UPI000270291E
UniProtKB Acc K9NQH7
UniProtKB ID K9NQH7_9PSED
UniRef100 UniRef100_K9NQH7
UniRef50 UniRef50_Q2KZD7
UniRef90 UniRef90_B7V0A6

Product

Feature Type CDS
Coding Frame 1
Product Name
30S ribosomal protein S20
Synonyms
Evidence for Translation
Charge (pH 7) 16.94
Kyte-Doolittle Hydrophobicity Value -0.460
Molecular Weight (kDa) 10.0
Isoelectric Point (pI) 11.78

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 509 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004222 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_04671
Search term: rpsT

Human Homologs

References

No references are associated with this feature.