Pseudomonas sp. UW4, PputUW4_05090
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. UW4
GCF_000316175.1|latest |
| Locus Tag |
PputUW4_05090
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 5812480 - 5813394 (+ strand) |
Cross-References
| RefSeq | YP_007032085.1 |
| GI | 426411986 |
| Entrez | 14050643 |
| NCBI Locus Tag | PputUW4_05090 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
LysR family transcriptional regulator
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -3.88 |
| Kyte-Doolittle Hydrophobicity Value | -0.015 |
| Molecular Weight (kDa) | 34155.1 |
| Isoelectric Point (pI) | 5.75 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 443 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000216 (492 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PputUW4_05090
Search term: LysR family transcriptional regulator
|
Human Homologs
References
No references are associated with this feature.