Pseudomonas sp. UW4, PputUW4_05309

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_05309
Name
Replicon chromosome
Genomic location 6037832 - 6038185 (- strand)

Cross-References

RefSeq YP_007032303.1
GI 426412204
Entrez 14054790
INSDC AFY22498.1
NCBI Locus Tag PputUW4_05309
UniParc UPI0002705535
UniProtKB Acc K9NTF5
UniProtKB ID K9NTF5_9PSED
UniRef100 UniRef100_K9NTF5
UniRef50 UniRef50_Q4KIK0
UniRef90 UniRef90_K9NTF5

Product

Feature Type CDS
Coding Frame 1
Product Name
endoribonuclease L-PSP
Synonyms
Evidence for Translation
Charge (pH 7) -6.32
Kyte-Doolittle Hydrophobicity Value -0.091
Molecular Weight (kDa) 12.9
Isoelectric Point (pI) 4.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 436 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001525 (1734 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_05309

Human Homologs

References

No references are associated with this feature.