Pseudomonas sp. UW4, PputUW4_05329 (xth)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_05329
Name
xth
Replicon chromosome
Genomic location 6057870 - 6058649 (+ strand)

Cross-References

RefSeq YP_007032323.1
GI 426412224
EC Number 3.1.11.2
Entrez 14054793
INSDC AFY22518.1
NCBI Locus Tag PputUW4_05329
UniParc UPI0001E972A3
UniProtKB Acc K9NTH4
UniProtKB ID K9NTH4_9PSED
UniRef100 UniRef100_V9R4E4
UniRef50 UniRef50_Q49P76
UniRef90 UniRef90_Q49P76

Product

Feature Type CDS
Coding Frame 1
Product Name
exodeoxyribonuclease III
Synonyms
Evidence for Translation
Charge (pH 7) -4.85
Kyte-Doolittle Hydrophobicity Value -0.435
Molecular Weight (kDa) 29.8
Isoelectric Point (pI) 4.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2MYI RNA BINDING PROTEIN 01/25/15 Solution Structure of Crc from P. syringae Lz4W Pseudomonas sp. Lz4W NOT SOLUTION NMR 98.5

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 507 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004901 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_05329
Search term: xth

Human Homologs

References

No references are associated with this feature.