Pseudomonas sp. UW4, PputUW4_05424 (srlR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_05424
Name
srlR
Replicon chromosome
Genomic location 6164759 - 6165535 (- strand)

Cross-References

RefSeq YP_007032418.1
GI 426412319
Entrez 14050892
INSDC AFY22613.1
NCBI Locus Tag PputUW4_05424
UniParc UPI0002702293
UniProtKB Acc K9NTR3
UniProtKB ID K9NTR3_9PSED
UniRef100 UniRef100_K9NTR3
UniRef50 UniRef50_Q9HT24
UniRef90 UniRef90_G8Q894

Product

Feature Type CDS
Coding Frame 1
Product Name
glucitol operon repressor
Synonyms
Evidence for Translation
Charge (pH 7) -5.58
Kyte-Doolittle Hydrophobicity Value -0.127
Molecular Weight (kDa) 28.4
Isoelectric Point (pI) 5.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 340 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005081 (530 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_05424
Search term: srlR

Human Homologs

References

No references are associated with this feature.