Pseudomonas protegens Pf-5, PFL_0009

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0009
Name
Replicon chromosome
Genomic location 9819 - 10817 (+ strand)

Cross-References

RefSeq YP_257161.1
GI 70733522
Entrez 3480609
INSDC AAY95427.1
NCBI Locus Tag PFL_0009
UniParc UPI000054CB67
UniProtKB Acc Q4KKS2
UniProtKB ID Q4KKS2_PSEF5
UniRef100 UniRef100_Q4KKS2
UniRef50 UniRef50_Q4KKS2
UniRef90 UniRef90_Q4KKS2

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.11
Kyte-Doolittle Hydrophobicity Value -0.324
Molecular Weight (kDa) 36569.4
Isoelectric Point (pI) 7.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 36 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001649 (334 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0009

Human Homologs

References

No references are associated with this feature.