Pseudomonas protegens Pf-5, PFL_0010

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0010
Name
Replicon chromosome
Genomic location 10836 - 13154 (+ strand)

Cross-References

RefSeq YP_257162.1
GI 70733523
Entrez 3480610
INSDC AAY95428.1
NCBI Locus Tag PFL_0010
UniParc UPI000054CB68
UniProtKB Acc Q4KKS1
UniProtKB ID Q4KKS1_PSEF5
UniRef100 UniRef100_Q4KKS1
UniRef50 UniRef50_Q4KKS1
UniRef90 UniRef90_Q4KKS1

Product

Feature Type CDS
Coding Frame 1
Product Name
CHASE domain/sensory box histidine kinase
Synonyms
Evidence for Translation
Charge (pH 7) -5.04
Kyte-Doolittle Hydrophobicity Value 0.064
Molecular Weight (kDa) 85444.7
Isoelectric Point (pI) 6.34

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 617 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001648 (378 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0010

Human Homologs

References

No references are associated with this feature.