Pseudomonas protegens Pf-5, PFL_0053

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0053
Name
Replicon chromosome
Genomic location 50560 - 51315 (+ strand)

Cross-References

RefSeq YP_257205.1
GI 70733566
EC Number 1.1.99.3
Entrez 3480653
INSDC AAY95471.1
NCBI Locus Tag PFL_0053
UniParc UPI000054CB93
UniProtKB Acc Q4KKM8
UniProtKB ID Q4KKM8_PSEF5
UniRef100 UniRef100_Q4KKM8
UniRef50 UniRef50_Q4KKM8
UniRef90 UniRef90_Q4KKM8

Product

Feature Type CDS
Coding Frame 1
Product Name
gluconate 2-dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -6.79
Kyte-Doolittle Hydrophobicity Value -0.271
Molecular Weight (kDa) 27189.5
Isoelectric Point (pI) 4.64

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 59 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003227 (431 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0053

Human Homologs

References

No references are associated with this feature.