Pseudomonas protegens Pf-5, PFL_0055

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0055
Name
Replicon chromosome
Genomic location 53115 - 54419 (+ strand)

Cross-References

RefSeq YP_257207.1
GI 70733568
EC Number 1.1.99.3
Entrez 3480655
INSDC AAY95473.1
NCBI Locus Tag PFL_0055
UniParc UPI000054CB95
UniProtKB Acc Q4KKM6
UniProtKB ID Q4KKM6_PSEF5
UniRef100 UniRef100_Q4KKM6
UniRef50 UniRef50_Q47945
UniRef90 UniRef90_Q4KKM6

Product

Feature Type CDS
Coding Frame 1
Product Name
gluconate 2-dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -8.30
Kyte-Doolittle Hydrophobicity Value -0.190
Molecular Weight (kDa) 46118.4
Isoelectric Point (pI) 5.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 190 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003225 (1168 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0055

Human Homologs

References

No references are associated with this feature.