Pseudomonas protegens Pf-5, PFL_0097

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0097
Name
Replicon chromosome
Genomic location 98378 - 99007 (- strand)

Cross-References

RefSeq YP_257249.1
GI 70733609
Entrez 3480696
INSDC AAY95514.1
NCBI Locus Tag PFL_0097
UniParc UPI000054CBBF
UniProtKB Acc Q4KKI4
UniProtKB ID Q4KKI4_PSEF5
UniRef100 UniRef100_Q4KKI4
UniRef50 UniRef50_A4XP77
UniRef90 UniRef90_Q4KKI4

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) 6.20
Kyte-Doolittle Hydrophobicity Value -0.092
Molecular Weight (kDa) 22.5
Isoelectric Point (pI) 10.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 49 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002401 (489 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0097
Search term: lipoprotein

Human Homologs

References

No references are associated with this feature.