Pseudomonas protegens Pf-5, PFL_0311

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0311
Name
Replicon chromosome
Genomic location 362489 - 363184 (+ strand)

Cross-References

RefSeq YP_257457.1
GI 70733817
Entrez 3480904
INSDC AAY95722.1
NCBI Locus Tag PFL_0311
UniParc UPI000054CC8E
UniProtKB Acc Q4KJX6
UniProtKB ID Q4KJX6_PSEF5
UniRef100 UniRef100_Q4KJX6
UniRef50 UniRef50_F6G1S7
UniRef90 UniRef90_Q4KJX6

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -4.45
Kyte-Doolittle Hydrophobicity Value -0.085
Molecular Weight (kDa) 24958.2
Isoelectric Point (pI) 5.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 86 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000057 (365 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0311

Human Homologs

References

No references are associated with this feature.