Pseudomonas protegens Pf-5, PFL_0334

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_0334
Name
Replicon	chromosome
Genomic location	385102 - 386214 (- strand)

Cross-References

RefSeq	YP_257479.1
GI	70733839
Entrez	3480926
INSDC	AAY95744.1
NCBI Locus Tag	PFL_0334
UniParc	UPI000054CCA4
UniProtKB Acc	Q4KJV4
UniProtKB ID	Q4KJV4_PSEF5
UniRef100	UniRef100_Q4KJV4
UniRef50	UniRef50_Q4KJV4
UniRef90	UniRef90_Q4KJV4

Product

Feature Type	CDS
Coding Frame	1
Product Name	polyamine/opine/phosphonate ABC transporter, POPT family, periplasmic substrate-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	-2.41
Kyte-Doolittle Hydrophobicity Value	-0.244
Molecular Weight (kDa)	40784.9
Isoelectric Point (pI)	6.59

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 99 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG019753 (13 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_0334 Search term: polyamine/opine/phosphonate ABC transporter, POPT family, periplasmic substrate-binding protein

Human Homologs

References