Pseudomonas protegens Pf-5, PFL_0482

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0482
Name
Replicon chromosome
Genomic location 550559 - 550993 (- strand)

Cross-References

RefSeq YP_257626.1
GI 70733986
Entrez 3481073
INSDC AAY95891.1
NCBI Locus Tag PFL_0482
UniParc UPI000054CD37
UniProtKB Acc Q4KJF7
UniProtKB ID Q4KJF7_PSEF5
UniRef100 UniRef100_Q4KJF7
UniRef50 UniRef50_G8Q2T6
UniRef90 UniRef90_G8Q2T6

Product

Feature Type CDS
Coding Frame 1
Product Name
thioredoxin
Synonyms
Evidence for Translation
Charge (pH 7) 5.25
Kyte-Doolittle Hydrophobicity Value -0.117
Molecular Weight (kDa) 15626.0
Isoelectric Point (pI) 8.71

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 638 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016897 (237 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0482
Search term: thioredoxin

Human Homologs

References

No references are associated with this feature.