Pseudomonas protegens Pf-5, PFL_0494

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_0494
Name
Replicon	chromosome
Genomic location	567157 - 568959 (- strand)

Cross-References

RefSeq	YP_257638.1
GI	70733998
EC Number	1.3.99.3
Entrez	3481085
INSDC	AAY95903.1
NCBI Locus Tag	PFL_0494
UniParc	UPI000054CD43
UniProtKB Acc	Q4KJE5
UniProtKB ID	Q4KJE5_PSEF5
UniRef100	UniRef100_Q4KJE5
UniRef50	UniRef50_Q4KJE5
UniRef90	UniRef90_Q4KJE5

Product

Feature Type	CDS
Coding Frame	1
Product Name	acyl-CoA dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7)	-8.56
Kyte-Doolittle Hydrophobicity Value	-0.179
Molecular Weight (kDa)	65991.4
Isoelectric Point (pI)	6.21

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 425 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004627 (505 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_0494 Search term: acyl-CoA dehydrogenase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000357862 acyl-CoA dehydrogenase short/branched chain [Source:HGNC Symbol;Acc:HGNC:91] E-value: 5.9e-23 Percent Identity: 30.5
Ensembl 110, assembly GRCh38.p14	ENSP00000357873 acyl-CoA dehydrogenase short/branched chain [Source:HGNC Symbol;Acc:HGNC:91] E-value: 5.9e-23 Percent Identity: 30.5

References