Pseudomonas protegens Pf-5, PFL_0678 (yciH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0678
Name
yciH
Replicon chromosome
Genomic location 790604 - 790975 (+ strand)

Cross-References

RefSeq YP_257820.2
GI 346642705
Entrez 3481267
INSDC AAY96085.2
NCBI Locus Tag PFL_0678
UniParc UPI000219FEA6
UniProtKB Acc Q4KIW3
UniProtKB ID Q4KIW3_PSEF5
UniRef100 UniRef100_Q4KIW3
UniRef50 UniRef50_Q4KIW3
UniRef90 UniRef90_Q4KIW3

Product

Feature Type CDS
Coding Frame 1
Product Name
translation initiation factor Sui1
Synonyms
Evidence for Translation
Charge (pH 7) 6.55
Kyte-Doolittle Hydrophobicity Value -0.038
Molecular Weight (kDa) 12613.5
Isoelectric Point (pI) 9.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 242 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004470 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0678
Search term: yciH

Human Homologs

References

No references are associated with this feature.