Pseudomonas protegens Pf-5, PFL_0683 (smtA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0683
Name
smtA
Replicon chromosome
Genomic location 795398 - 796147 (+ strand)

Cross-References

RefSeq YP_257825.1
GI 70734185
Entrez 3481272
INSDC AAY96090.1
NCBI Locus Tag PFL_0683
UniParc UPI000054CDFD
UniProtKB Acc Q4KIV8
UniProtKB ID Q4KIV8_PSEF5
UniRef100 UniRef100_Q4KIV8
UniRef50 UniRef50_G8Q623
UniRef90 UniRef90_G8Q623

Product

Feature Type CDS
Coding Frame 1
Product Name
SmtA protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.42
Kyte-Doolittle Hydrophobicity Value -0.227
Molecular Weight (kDa) 28.2
Isoelectric Point (pI) 6.92

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 154 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004428 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0683
Search term: smtA
Search term: SmtA protein

Human Homologs

References

No references are associated with this feature.