Pseudomonas protegens Pf-5, PFL_0702

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0702
Name
Replicon chromosome
Genomic location 814741 - 816360 (- strand)

Cross-References

RefSeq YP_257844.1
GI 70734204
Entrez 3481291
INSDC AAY96109.1
NCBI Locus Tag PFL_0702
UniParc UPI000054CE10
UniProtKB Acc Q4KIT9
UniProtKB ID Q4KIT9_PSEF5
UniRef100 UniRef100_Q4KIT9
UniRef50 UniRef50_Q4KIT9
UniRef90 UniRef90_Q4KIT9

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) -0.81
Kyte-Doolittle Hydrophobicity Value 0.300
Molecular Weight (kDa) 47958.8
Isoelectric Point (pI) 5.83

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 11 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG019789 (132 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0702
Search term: lipoprotein

Human Homologs

References

No references are associated with this feature.