Pseudomonas protegens Pf-5, PFL_0731 (yicE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0731
Name
yicE
Replicon chromosome
Genomic location 847938 - 849332 (- strand)

Cross-References

RefSeq YP_257873.2
GI 346642715
Entrez 3481320
INSDC AAY96138.2
NCBI Locus Tag PFL_0731
UniParc UPI000219FEBB
UniProtKB Acc Q4KIR0
UniProtKB ID Q4KIR0_PSEF5
UniRef100 UniRef100_Q4KIR0
UniRef50 UniRef50_Q4KIR0
UniRef90 UniRef90_Q4KIR0

Product

Feature Type CDS
Coding Frame 1
Product Name
high-affinity xanthine transporter YicE
Synonyms
Evidence for Translation
Charge (pH 7) 7.79
Kyte-Doolittle Hydrophobicity Value 0.814
Molecular Weight (kDa) 48462.0
Isoelectric Point (pI) 9.49

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 344 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000164 (826 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0731
Search term: yicE

Human Homologs

References

No references are associated with this feature.