Pseudomonas protegens Pf-5, PFL_0826 (grpE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0826
Name
grpE
Replicon chromosome
Genomic location 953847 - 954413 (+ strand)

Cross-References

RefSeq YP_257961.1
GI 70734321
Entrez 3481409
INSDC AAY96226.1
NCBI Locus Tag PFL_0826
UniParc UPI000054CE85
UniProtKB Acc Q4KIH2
UniProtKB ID GRPE_PSEF5
UniRef100 UniRef100_Q4KIH2
UniRef50 UniRef50_Q4KIH2
UniRef90 UniRef90_Q4KIH2

Product

Feature Type CDS
Coding Frame 1
Product Name
heat shock protein GrpE
Synonyms
Evidence for Translation
Charge (pH 7) -13.03
Kyte-Doolittle Hydrophobicity Value -0.539
Molecular Weight (kDa) 20.8
Isoelectric Point (pI) 4.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 612 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004406 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0826
Search term: grpE

Human Homologs

References

No references are associated with this feature.