Strain |
Pseudomonas protegens Pf-5
GCF_000012265.1|latest |
Locus Tag |
PFL_0846
|
Name |
truB
|
Replicon | chromosome |
Genomic location | 976448 - 977365 (+ strand) |
RefSeq | YP_257979.1 |
GI | 70734339 |
EC Number | 5.4.99.- |
Entrez | 3481427 |
INSDC | AAY96244.1 |
NCBI Locus Tag | PFL_0846 |
UniParc | UPI000054CE97 |
UniProtKB Acc | Q4KIF4 |
UniProtKB ID | TRUB_PSEF5 |
UniRef100 | UniRef100_Q4KIF4 |
UniRef50 | UniRef50_Q4KIF4 |
UniRef90 | UniRef90_Q4KIF4 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
tRNA pseudouridine synthase B
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -4.12 |
Kyte-Doolittle Hydrophobicity Value | -0.229 |
Molecular Weight (kDa) | 33.5 |
Isoelectric Point (pI) | 5.51 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 658 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004387 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PFL_0846
Search term: truB
Search term: tRNA pseudouridine synthase B
|
Ensembl
110, assembly
GRCh38.p14
|
TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
E-value:
1.5e-35
Percent Identity:
39.6
|